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Summary

Sci Name Chaetodon_trifascialis Chaetodon_trifascialis Chaetodon_trifascialis Chaetodon_trifascialis
Clade Fishes
Lineage Ray-finned_fishes
Assembly_ID GCF_039877785.1
# of retrocopies 201
# of Parental genes 146
Retroname Coord Strand Parental Conservation Has_ORF Selection
actb1P1 NC_092070.1:9329964-9331623 - actb1 Orthologus coding under_selection UCSC
actb2P1 NC_092056.1:18743824-18745991 + actb2 Orthologus coding under_selection UCSC
actb2P2 NC_092057.1:10690258-10692233 - actb2 Orthologus coding not_under_selection UCSC
actb2P3 NC_092069.1:18376215-18377195 + actb2 Orthologus coding not_under_selection UCSC
actb2P4 NC_092074.1:19344087-19346167 - actb2 Orthologus coding not_under_selection UCSC
adcy9P1 NC_092070.1:15382660-15382994 - adcy9 Orthologus coding not_under_selection UCSC
adora2abP1 NC_092061.1:24682747-24683006 - adora2ab Orthologus coding under_selection UCSC
aldh18a1P1 NC_092068.1:9176970-9177246 - aldh18a1 Orthologus coding under_selection UCSC
arhgap46aP1 NC_092059.1:29733060-29733206 - arhgap46a Specie-Specific non_coding - UCSC
bsk146P1 NC_092070.1:23591380-23592098 + bsk146 Specie-Specific coding under_selection UCSC
cables2bP1 NC_092063.1:5700532-5700736 + cables2b Orthologus non_coding - UCSC
chrm3bP1 NC_092068.1:19113941-19114102 - chrm3b Orthologus non_coding - UCSC
cmpkP1 NC_092070.1:7328759-7328923 - cmpk Specie-Specific non_coding - UCSC
cnga1bP1 NC_092057.1:11813607-11814032 + cnga1b Orthologus coding under_selection UCSC
cnga1bP2 NC_092059.1:4024606-4025125 + cnga1b Orthologus coding not_under_selection UCSC
cnga1bP3 NC_092071.1:16327071-16327418 + cnga1b Orthologus coding under_selection UCSC
diras1aP1 NC_092069.1:19730515-19731411 - diras1a Orthologus coding not_under_selection UCSC
eef1b2P1 NC_092064.1:6705611-6706002 + eef1b2 Orthologus coding not_under_selection UCSC
eef1b2P2 NC_092066.1:9066247-9066417 + eef1b2 Orthologus non_coding - UCSC
epha4lP1 NC_092058.1:6545568-6545744 - epha4l Specie-Specific non_coding - UCSC
epha4lP2 NC_092059.1:15356287-15357171 + epha4l Orthologus coding not_under_selection UCSC
fabp4bP1 NC_092075.1:21640815-21641018 + fabp4b Specie-Specific non_coding - UCSC
fgfrl1aP1 NC_092069.1:14472394-14472562 + fgfrl1a Orthologus non_coding - UCSC
fkbp1bP1 NC_092077.1:6421692-6421838 - fkbp1b Specie-Specific non_coding - UCSC
fzd4P1 NC_092064.1:14353190-14353417 + fzd4 Orthologus non_coding - UCSC
gabrb2aP1 NC_092059.1:4103889-4109874 - gabrb2a Specie-Specific coding not_under_selection UCSC
gabrr3aP1 NC_092073.1:22349472-22349636 - gabrr3a Orthologus non_coding - UCSC
gpx3P1 NC_092062.1:7649629-7650060 + gpx3 Orthologus coding not_under_selection UCSC
grin2aaP1 NC_092057.1:20412334-20412506 + grin2aa Orthologus non_coding - UCSC
grin2aaP2 NC_092057.1:2567582-2568778 + grin2aa Orthologus non_coding - UCSC
grin2daP1 NC_092062.1:20342088-20342277 + grin2da Orthologus non_coding - UCSC
grin2daP2 NC_092070.1:24579332-24579475 + grin2da Orthologus non_coding - UCSC
grin2daP3 NC_092076.1:5419768-5421772 - grin2da Orthologus non_coding - UCSC
grm5bP1 NC_092069.1:21193586-21193867 - grm5b Orthologus non_coding - UCSC
grm5bP2 NC_092074.1:14869696-14869986 - grm5b Orthologus coding under_selection UCSC
grm8aP1 NC_092065.1:27557021-27557187 + grm8a Orthologus non_coding - UCSC
h3f3cP1 NC_092057.1:8649529-8649944 - h3f3c Specie-Specific coding not_under_selection UCSC
hk1P1 NC_092057.1:10381633-10382518 - hk1 Orthologus non_coding - UCSC
hmg20aP1 NC_092067.1:11026165-11026457 + hmg20a Specie-Specific non_coding - UCSC
hmg20aP2 NC_092072.1:22710198-22710518 + hmg20a Specie-Specific coding not_under_selection UCSC
hsc70P1 NC_092063.1:18516592-18517278 + hsc70 Orthologus coding under_selection UCSC
htatip2P1 NC_092063.1:28203571-28203713 - htatip2 Specie-Specific non_coding - UCSC
irx1bP1 NC_092056.1:23278813-23278973 - irx1b Orthologus non_coding - UCSC
irx1bP2 NC_092062.1:13419862-13420096 - irx1b Orthologus coding not_under_selection UCSC
irx1bP3 NC_092065.1:28840827-28840982 - irx1b Orthologus non_coding - UCSC
irx4bP1 NC_092056.1:23479028-23479210 + irx4b Orthologus non_coding - UCSC
kcnh5bP1 NC_092057.1:8392305-8393434 + kcnh5b Specie-Specific coding under_selection UCSC
kcnh5bP2 NC_092068.1:21390189-21391863 - kcnh5b Orthologus coding not_under_selection UCSC
kcnh5bP3 NC_092074.1:10747723-10754594 - kcnh5b Orthologus coding not_under_selection UCSC
kcnv2aP1 NC_092061.1:1241383-1243103 - kcnv2a Orthologus coding not_under_selection UCSC
lgi1bP1 NC_092068.1:15646765-15647117 - lgi1b Orthologus coding under_selection UCSC
LOC139327747P1 NC_092061.1:20064139-20064513 - LOC139327747 Orthologus coding not_under_selection UCSC
LOC139327747P2 NC_092065.1:22745187-22745561 + LOC139327747 Orthologus coding not_under_selection UCSC
LOC139327849P1 NC_092074.1:3953793-3954104 - LOC139327849 Orthologus coding under_selection UCSC
LOC139327867P1 NC_092066.1:14359162-14359545 + LOC139327867 Orthologus coding not_under_selection UCSC
LOC139327905P1 NC_092066.1:10056915-10057194 + LOC139327905 Orthologus coding not_under_selection UCSC
LOC139327905P2 NC_092067.1:22330610-22330923 - LOC139327905 Orthologus coding under_selection UCSC
LOC139330115P1 NC_092059.1:22152747-22153998 - LOC139330115 Specie-Specific coding not_under_selection UCSC
LOC139330634P1 NC_092057.1:16024123-16024281 + LOC139330634 Orthologus non_coding - UCSC
LOC139330634P2 NC_092060.1:15635195-15635457 + LOC139330634 Orthologus coding not_under_selection UCSC
LOC139331525P1 NC_092065.1:1202590-1202757 + LOC139331525 Specie-Specific non_coding - UCSC
LOC139331977P1 NC_092075.1:9292118-9292337 - LOC139331977 Orthologus non_coding - UCSC
LOC139332526P1 NC_092056.1:31688094-31688471 - LOC139332526 Orthologus coding under_selection UCSC
LOC139332807P1 NC_092066.1:327493-327770 - LOC139332807 Specie-Specific coding not_under_selection UCSC
LOC139332833P1 NC_092075.1:8100591-8100766 - LOC139332833 Orthologus non_coding - UCSC
LOC139334000P1 NC_092072.1:23231552-23231732 - LOC139334000 Orthologus non_coding - UCSC
LOC139334626P1 NC_092074.1:16730988-16731278 - LOC139334626 Orthologus coding not_under_selection UCSC
LOC139334807P1 NC_092063.1:5689466-5689765 + LOC139334807 Orthologus coding not_under_selection UCSC
LOC139334807P2 NC_092066.1:27483965-27484152 - LOC139334807 Specie-Specific non_coding - UCSC
LOC139334807P3 NC_092079.1:5677523-5677707 + LOC139334807 Orthologus non_coding - UCSC
LOC139334987P1 NC_092063.1:6125117-6125367 - LOC139334987 Orthologus non_coding - UCSC
LOC139335931P1 NC_092067.1:5635500-5635709 + LOC139335931 Orthologus non_coding - UCSC
LOC139336099P1 NC_092057.1:17462325-17462728 - LOC139336099 Specie-Specific coding under_selection UCSC
LOC139336099P2 NC_092068.1:25356407-25356819 + LOC139336099 Specie-Specific coding under_selection UCSC
LOC139336099P3 NC_092071.1:5063565-5063978 + LOC139336099 Specie-Specific coding under_selection UCSC
LOC139336099P4 NC_092077.1:21054996-21055411 - LOC139336099 Specie-Specific coding under_selection UCSC
LOC139336603P1 NC_092060.1:13542711-13542887 + LOC139336603 Specie-Specific non_coding - UCSC
LOC139337604P1 NC_092077.1:16396383-16396664 + LOC139337604 Orthologus coding not_under_selection UCSC
LOC139337708P1 NC_092078.1:18731633-18731985 - LOC139337708 Specie-Specific coding not_under_selection UCSC
LOC139338659P1 NC_092073.1:21044906-21045094 + LOC139338659 Specie-Specific non_coding - UCSC
LOC139338854P1 NC_092057.1:1056658-1057680 - LOC139338854 Specie-Specific non_coding - UCSC
LOC139339333P1 NC_092066.1:18535934-18536182 + LOC139339333 Orthologus coding under_selection UCSC
LOC139340083P1 NC_092079.1:2348915-2349202 + LOC139340083 Orthologus coding not_under_selection UCSC
LOC139340146P1 NC_092078.1:8934308-8935043 - LOC139340146 Orthologus coding under_selection UCSC
LOC139340291P1 NC_092066.1:25649418-25649648 - LOC139340291 Orthologus coding under_selection UCSC
LOC139340291P2 NC_092079.1:13752481-13755872 + LOC139340291 Orthologus coding not_under_selection UCSC
LOC139340299P1 NC_092065.1:24654191-24654403 - LOC139340299 Specie-Specific non_coding - UCSC
LOC139340304P1 NC_092064.1:20613767-20614183 + LOC139340304 Orthologus coding not_under_selection UCSC
LOC139340352P1 NC_092079.1:11409961-11410557 - LOC139340352 Orthologus non_coding - UCSC
LOC139340536P1 NC_092070.1:12746808-12748073 + LOC139340536 Orthologus coding under_selection UCSC
LOC139340604P1 NC_092060.1:23698212-23699015 + LOC139340604 Specie-Specific coding under_selection UCSC
LOC139340635P1 NC_092057.1:2373753-2374066 + LOC139340635 Specie-Specific coding not_under_selection UCSC
LOC139340635P2 NC_092062.1:15729436-15729724 + LOC139340635 Specie-Specific coding not_under_selection UCSC
LOC139340635P3 NC_092065.1:678796-679014 + LOC139340635 Specie-Specific non_coding - UCSC
LOC139340635P4 NC_092067.1:3387213-3387453 - LOC139340635 Specie-Specific non_coding - UCSC
LOC139341261P1 NC_092061.1:27571780-27572840 - LOC139341261 Orthologus coding under_selection UCSC
LOC139342470P1 NC_092067.1:14715033-14715310 - LOC139342470 Orthologus non_coding - UCSC
LOC139342887P1 NC_092076.1:11568165-11569052 + LOC139342887 Orthologus coding under_selection UCSC
LOC139342963P1 NC_092060.1:17889490-17889656 + LOC139342963 Orthologus non_coding - UCSC
LOC139343285P1 NC_092072.1:5381267-5381641 - LOC139343285 Orthologus coding under_selection UCSC
LOC139343768P1 NC_092076.1:11298661-11299793 - LOC139343768 Orthologus non_coding - UCSC
LOC139344453P1 NC_092070.1:25098933-25099814 + LOC139344453 Orthologus coding under_selection UCSC
LOC139344533P1 NC_092060.1:14868330-14868887 - LOC139344533 Orthologus coding not_under_selection UCSC
LOC139344572P1 NC_092064.1:19449038-19451313 + LOC139344572 Orthologus coding under_selection UCSC
LOC139344799P1 NC_092070.1:18482468-18483055 + LOC139344799 Orthologus coding under_selection UCSC
LOC139344838P1 NC_092078.1:18931612-18931826 - LOC139344838 Orthologus non_coding - UCSC
LOC139345501P1 NC_092066.1:11691202-11692218 + LOC139345501 Orthologus coding under_selection UCSC
LOC139345545P1 NC_092062.1:7092889-7093269 + LOC139345545 Orthologus coding under_selection UCSC
LOC139346310P1 NC_092070.1:15414971-15415677 - LOC139346310 Orthologus coding under_selection UCSC
LOC139346333P1 NC_092062.1:20444201-20444353 - LOC139346333 Orthologus non_coding - UCSC
LOC139346521P1 NC_092063.1:15381793-15381949 + LOC139346521 Orthologus non_coding - UCSC
LOC139346706P1 NC_092071.1:14092519-14093550 - LOC139346706 Orthologus non_coding - UCSC
LOC139347555P1 NC_092067.1:12270758-12270914 - LOC139347555 Orthologus non_coding - UCSC
LOC139348794P1 NC_092061.1:29496112-29496444 + LOC139348794 Orthologus coding under_selection UCSC
LOC139348999P1 NC_092061.1:21951947-21952194 - LOC139348999 Specie-Specific coding not_under_selection UCSC
LOC139349147P1 NC_092072.1:17094891-17095196 - LOC139349147 Orthologus coding under_selection UCSC
LOC139349167P1 NC_092061.1:15404042-15404674 + LOC139349167 Orthologus coding under_selection UCSC
LOC139349486P1 NC_092068.1:18917979-18918220 - LOC139349486 Orthologus coding under_selection UCSC
LOC139350095P1 NC_092068.1:25745005-25745159 + LOC139350095 Orthologus non_coding - UCSC
LOC139350238P1 NC_092070.1:15915026-15915886 - LOC139350238 Orthologus coding not_under_selection UCSC
LOC139350423P1 NC_092065.1:8471753-8471959 + LOC139350423 Orthologus non_coding - UCSC
LOC139350909P1 NC_092065.1:24979628-24980445 + LOC139350909 Orthologus coding not_under_selection UCSC
LOC139351129P1 NC_092057.1:4725719-4727253 + LOC139351129 Specie-Specific non_coding - UCSC
LOC139351186P1 NC_092071.1:15487978-15490129 - LOC139351186 Orthologus coding not_under_selection UCSC
LOC139351186P2 NC_092079.1:6302500-6302655 - LOC139351186 Orthologus non_coding - UCSC
LOC139352019P1 NC_092060.1:13560637-13560876 - LOC139352019 Orthologus coding under_selection UCSC
LOC139352019P2 NC_092067.1:12270272-12270527 - LOC139352019 Orthologus coding not_under_selection UCSC
LOC139352019P3 NC_092067.1:6080933-6081583 + LOC139352019 Orthologus coding under_selection UCSC
LOC139352019P4 NC_092071.1:16443979-16444264 - LOC139352019 Orthologus coding under_selection UCSC
LOC139352019P5 NC_092074.1:23622285-23622523 + LOC139352019 Orthologus coding not_under_selection UCSC
mibp2P1 NC_092056.1:18386815-18386986 - mibp2 Specie-Specific non_coding - UCSC
mibp2P2 NC_092062.1:5959920-5960468 - mibp2 Specie-Specific coding not_under_selection UCSC
mibp2P3 NC_092063.1:8158532-8158704 - mibp2 Specie-Specific non_coding - UCSC
mibp2P4 NC_092074.1:5288684-5288848 - mibp2 Specie-Specific non_coding - UCSC
mibp2P5 NC_092078.1:11034385-11034754 + mibp2 Specie-Specific coding under_selection UCSC
mrpl57P1 NC_092079.1:905218-905430 + mrpl57 Specie-Specific non_coding - UCSC
mrpl57P2 NW_027255838.1:842189-842401 + mrpl57 Specie-Specific non_coding - UCSC
mrs2P1 NC_092064.1:19398040-19398172 + mrs2 Specie-Specific non_coding - UCSC
ndufa13P1 NC_092068.1:21472018-21472305 - ndufa13 Specie-Specific coding not_under_selection UCSC
nlgn2bP1 NC_092059.1:26913689-26915668 - nlgn2b Orthologus coding under_selection UCSC
nlgn2bP2 NC_092071.1:15851648-15852027 - nlgn2b Orthologus coding not_under_selection UCSC
npy2rlP1 NC_092057.1:3614809-3614993 + npy2rl Orthologus non_coding - UCSC
npy8arP1 NC_092061.1:1635950-1636174 + npy8ar Orthologus coding under_selection UCSC
nr2f5P1 NC_092065.1:13038273-13038539 + nr2f5 Orthologus coding not_under_selection UCSC
nr2f6aP1 NC_092056.1:26470399-26470737 + nr2f6a Orthologus coding not_under_selection UCSC
nudt15P1 NC_092062.1:4123377-4123953 - nudt15 Specie-Specific coding not_under_selection UCSC
oprm1P1 NC_092062.1:15417366-15418290 + oprm1 Orthologus coding not_under_selection UCSC
oprm1P2 NC_092066.1:8735463-8735682 - oprm1 Orthologus non_coding - UCSC
oprm1P3 NC_092072.1:20156347-20156510 + oprm1 Orthologus non_coding - UCSC
oprm1P4 NC_092073.1:17757381-17757540 - oprm1 Orthologus non_coding - UCSC
pard6aP1 NC_092063.1:24732972-24733312 + pard6a Orthologus coding under_selection UCSC
pard6aP2 NC_092072.1:10754566-10754735 - pard6a Orthologus non_coding - UCSC
piezo1P1 NC_092066.1:6133273-6133511 + piezo1 Orthologus coding under_selection UCSC
pik3caP1 NC_092066.1:17752699-17752951 + pik3ca Orthologus coding not_under_selection UCSC
plxnd1P1 NC_092077.1:12908815-12908996 - plxnd1 Orthologus non_coding - UCSC
ppifbP1 NC_092061.1:887890-888048 - ppifb Orthologus non_coding - UCSC
prdx2P1 NC_092056.1:31528006-31528386 - prdx2 Specie-Specific coding not_under_selection UCSC
prickle2aP1 NC_092058.1:26298031-26299466 + prickle2a Specie-Specific coding not_under_selection UCSC
prkacabP1 NC_092059.1:13505750-13505904 - prkacab Orthologus non_coding - UCSC
prkacabP2 NC_092066.1:11110225-11110375 + prkacab Orthologus non_coding - UCSC
prkacabP3 NC_092070.1:17683828-17683973 + prkacab Orthologus non_coding - UCSC
prkd1P1 NC_092064.1:18836778-18837022 - prkd1 Orthologus coding not_under_selection UCSC
prkd1P2 NC_092069.1:10751221-10751460 + prkd1 Orthologus coding not_under_selection UCSC
prkd1P3 NC_092074.1:21825808-21826489 - prkd1 Orthologus non_coding - UCSC
prkd1P4 NC_092078.1:5779378-5779617 + prkd1 Orthologus coding not_under_selection UCSC
prpf38aP1 NC_092059.1:28238167-28238376 + prpf38a Specie-Specific non_coding - UCSC
rab39bbP1 NC_092071.1:9692680-9693637 - rab39bb Orthologus coding not_under_selection UCSC
rarabP1 NC_092076.1:13075625-13076222 + rarab Orthologus non_coding - UCSC
rbm44P1 NC_092058.1:23549578-23550073 - rbm44 Specie-Specific coding not_under_selection UCSC
rpl18P1 NC_092057.1:12674333-12674918 - rpl18 Specie-Specific coding not_under_selection UCSC
sec23aP1 NC_092057.1:22178953-22179167 + sec23a Orthologus non_coding - UCSC
six7P1 NC_092069.1:14612466-14612663 + six7 Orthologus non_coding - UCSC
slc17a7aP1 NC_092065.1:10101141-10101294 - slc17a7a Orthologus non_coding - UCSC
slc23a1P1 NC_092061.1:14625756-14625911 + slc23a1 Orthologus non_coding - UCSC
slc8a1bP1 NC_092057.1:8538630-8539651 + slc8a1b Specie-Specific coding not_under_selection UCSC
slc8a1bP2 NC_092069.1:20273324-20273539 - slc8a1b Orthologus non_coding - UCSC
smad1P1 NC_092065.1:10891838-10891981 - smad1 Orthologus non_coding - UCSC
smad5P1 NC_092056.1:7491227-7491370 - smad5 Orthologus non_coding - UCSC
sp4P1 NC_092063.1:13989230-13989442 - sp4 Orthologus non_coding - UCSC
sptan1P1 NC_092062.1:5640757-5640925 - sptan1 Specie-Specific non_coding - UCSC
tenm2aP1 NC_092060.1:25210392-25210623 - tenm2a Orthologus coding under_selection UCSC
tktbP1 NC_092058.1:30293628-30293875 + tktb Specie-Specific non_coding - UCSC
tktbP2 NC_092068.1:2995304-2995627 - tktb Specie-Specific non_coding - UCSC
tmcc1aP1 NC_092058.1:15181156-15181492 - tmcc1a Orthologus coding not_under_selection UCSC
tmem184cP1 NC_092070.1:13955149-13955820 - tmem184c Specie-Specific coding not_under_selection UCSC
tpteP1 NC_092066.1:20737320-20737466 + tpte Specie-Specific non_coding - UCSC
triobP1 NC_092072.1:17514812-17514994 - triob Orthologus non_coding - UCSC
tubb5P1 NC_092058.1:10341586-10342339 + tubb5 Orthologus coding not_under_selection UCSC
tubb6P1 NC_092057.1:20679586-20680652 - tubb6 Orthologus coding not_under_selection UCSC
tubb6P2 NC_092062.1:21360287-21361316 + tubb6 Orthologus coding not_under_selection UCSC
tubb6P3 NC_092069.1:8151696-8152774 + tubb6 Orthologus coding not_under_selection UCSC
tubb6P4 NC_092072.1:3450850-3452106 + tubb6 Orthologus coding under_selection UCSC
tyw5P1 NC_092062.1:1147101-1147241 + tyw5 Specie-Specific non_coding - UCSC
utp25P1 NC_092059.1:28555061-28555374 + utp25 Specie-Specific non_coding - UCSC
vps13aP1 NC_092078.1:16719247-16719459 + vps13a Specie-Specific non_coding - UCSC
vsnl1aP1 NC_092072.1:10596684-10596891 - vsnl1a Orthologus non_coding - UCSC
vsnl1aP2 NC_092074.1:16651282-16651486 - vsnl1a Orthologus non_coding - UCSC
wfikkn2aP1 NC_092076.1:19210241-19210499 - wfikkn2a Orthologus coding under_selection UCSC
ywhabaP1 NC_092064.1:23155900-23156125 + ywhaba Orthologus coding not_under_selection UCSC
ywhabaP2 NC_092071.1:20677067-20677291 - ywhaba Orthologus coding not_under_selection UCSC
zcchc8P1 NC_092056.1:5656285-5656522 + zcchc8 Specie-Specific non_coding - UCSC