Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Sci Name Calypte_anna Calypte_anna Calypte_anna Calypte_anna
Clade Birds
Lineage Birds
Assembly_ID GCF_003957555.1
# of retrocopies 76
# of Parental genes 60
Retroname Coord Strand Parental Conservation Has_ORF Selection
ACTA1P1 NC_044263.1:1062047-1063873 - ACTA1 Orthologus coding under_selection UCSC
ACTBP1 NC_044246.1:4180890-4181220 + ACTB Orthologus coding under_selection UCSC
ACTBP2 NC_044251.1:13948837-13949159 + ACTB Orthologus coding under_selection UCSC
ACTC1P1 NC_044260.1:3659793-3662107 + ACTC1 Orthologus coding under_selection UCSC
ACTG1P1 NC_044256.1:2931704-2932801 - ACTG1 Orthologus coding not_under_selection UCSC
ARIH1P1 NC_044256.1:8589584-8590389 - ARIH1 Specie-Specific non_coding - UCSC
ATP23P1 NC_044245.1:150090576-150090838 + ATP23 Orthologus non_coding - UCSC
BMP2KP1 NC_044274.1:62701168-62701448 - BMP2K Orthologus coding not_under_selection UCSC
CAPSLP1 NC_044276.1:14487505-14488099 + CAPSL Specie-Specific coding not_under_selection UCSC
CAPSLP2 NC_044276.1:21394867-21395402 + CAPSL Specie-Specific coding not_under_selection UCSC
CCT3P1 NC_044251.1:14485942-14486122 + CCT3 Orthologus non_coding - UCSC
CFL2P1 NC_044244.1:193276959-193277941 - CFL2 Orthologus coding not_under_selection UCSC
CREB3L2P1 NC_044248.1:29376780-29377174 - CREB3L2 Orthologus coding not_under_selection UCSC
CSNK1G1P1 NC_044244.1:164262703-164263408 + CSNK1G1 Orthologus coding not_under_selection UCSC
CTCFP1 NC_044244.1:75361928-75362072 + CTCF Specie-Specific non_coding - UCSC
DAB2P1 NC_044245.1:134160203-134160443 - DAB2 Orthologus non_coding - UCSC
DAPK3P1 NC_044244.1:171824097-171824323 + DAPK3 Orthologus coding not_under_selection UCSC
DNAJC15P1 NC_044246.1:26762330-26762915 - DNAJC15 Orthologus coding not_under_selection UCSC
DNAJC15P2 NC_044246.1:63417983-63418261 + DNAJC15 Orthologus non_coding - UCSC
DTX2P1 NC_044248.1:15340201-15340391 - DTX2 Orthologus non_coding - UCSC
DYNC2LI1P1 NC_044276.1:13182625-13184101 + DYNC2LI1 Specie-Specific non_coding - UCSC
EIF1P1 NC_044245.1:76948557-76948908 - EIF1 Specie-Specific non_coding - UCSC
FKBP6P1 NC_044245.1:27297399-27297544 - FKBP6 Specie-Specific non_coding - UCSC
GOLGA5P1 NC_044244.1:138655820-138656075 - GOLGA5 Orthologus non_coding - UCSC
GON4LP1 NC_044276.1:24620000-24621181 + GON4L Specie-Specific coding not_under_selection UCSC
HPCAL4P1 NC_044268.1:4456166-4456414 + HPCAL4 Orthologus coding under_selection UCSC
HSPA8P1 NC_044251.1:36131101-36131853 - HSPA8 Orthologus coding under_selection UCSC
LIN28BP1 NW_022045449.1:390863-391402 - LIN28B Specie-Specific coding not_under_selection UCSC
LOC103525566P1 NC_044244.1:15675450-15675700 - LOC103525566 Orthologus coding under_selection UCSC
LOC103525566P2 NC_044244.1:48850746-48850992 - LOC103525566 Orthologus coding not_under_selection UCSC
LOC103526486P1 NC_044246.1:75341426-75341620 - LOC103526486 Orthologus non_coding - UCSC
LOC103526486P2 NC_044247.1:11010146-11010350 - LOC103526486 Orthologus non_coding - UCSC
LOC103526486P3 NC_044268.1:2453354-2453494 - LOC103526486 Orthologus non_coding - UCSC
LOC103529205P1 NC_044262.1:5688691-5688902 - LOC103529205 Orthologus non_coding - UCSC
LOC103531231P1 NC_044258.1:9649436-9649756 + LOC103531231 Orthologus coding under_selection UCSC
LOC103531231P2 NC_044269.1:6412879-6413209 - LOC103531231 Specie-Specific coding under_selection UCSC
LOC103533538P1 NC_044253.1:16362477-16363368 - LOC103533538 Orthologus coding under_selection UCSC
LOC103533538P2 NC_044275.1:1419823-1420689 - LOC103533538 Orthologus coding under_selection UCSC
LOC103535124P1 NC_044244.1:48857185-48857551 - LOC103535124 Orthologus coding not_under_selection UCSC
LOC103538126P1 NC_044275.1:1436022-1436911 + LOC103538126 Orthologus coding not_under_selection UCSC
LOC115598855P1 NC_044256.1:1230296-1231078 - LOC115598855 Specie-Specific coding not_under_selection UCSC
LOC115598855P2 NC_044256.1:2338521-2338682 + LOC115598855 Specie-Specific non_coding - UCSC
LOC115598855P3 NC_044256.1:6372599-6373378 - LOC115598855 Specie-Specific coding not_under_selection UCSC
LOC115598855P4 NC_044274.1:47457493-47458275 + LOC115598855 Specie-Specific coding not_under_selection UCSC
LOC115600228P1 NC_044276.1:18386240-18386928 + LOC115600228 Specie-Specific non_coding - UCSC
LOC115600228P2 NC_044276.1:2629142-2629511 + LOC115600228 Specie-Specific non_coding - UCSC
MAD2L1P1 NC_044245.1:41151107-41151503 + MAD2L1 Orthologus non_coding - UCSC
ME2P1 NC_044251.1:39929037-39930460 + ME2 Specie-Specific coding not_under_selection UCSC
MFGE8P1 NC_044254.1:2317957-2318726 - MFGE8 Specie-Specific coding under_selection UCSC
MTFR1P1 NC_044252.1:32210715-32211115 + MTFR1 Orthologus non_coding - UCSC
NDUFA10P1 NC_044244.1:17529462-17529597 + NDUFA10 Orthologus non_coding - UCSC
NME6P1 NC_044251.1:2849122-2849353 + NME6 Specie-Specific non_coding - UCSC
PCBD2P1 NC_044253.1:35718148-35718427 - PCBD2 Orthologus non_coding - UCSC
PIGUP1 NC_044253.1:15064239-15064664 - PIGU Orthologus non_coding - UCSC
PPP2CAP1 NC_044244.1:195173915-195174075 - PPP2CA Specie-Specific non_coding - UCSC
PPP2CAP2 NC_044246.1:78050278-78050938 - PPP2CA Specie-Specific non_coding - UCSC
PPP2CAP3 NC_044263.1:9127796-9128399 + PPP2CA Orthologus non_coding - UCSC
PSMA7P1 NC_044257.1:1956197-1956467 - PSMA7 Orthologus non_coding - UCSC
PTAR1P1 NC_044251.1:2249184-2250218 - PTAR1 Specie-Specific coding not_under_selection UCSC
RANGAP1P1 NC_044274.1:31337814-31338184 + RANGAP1 Specie-Specific non_coding - UCSC
RAP2CP1 NC_044255.1:24960926-24961423 - RAP2C Orthologus coding not_under_selection UCSC
RHOCP1 NC_044246.1:105506946-105507326 + RHOC Orthologus coding not_under_selection UCSC
RRBP1P1 NC_044276.1:4764485-4764950 - RRBP1 Specie-Specific coding not_under_selection UCSC
SH3BP2P1 NC_044268.1:428064-428810 + SH3BP2 Orthologus coding not_under_selection UCSC
STMP1P1 NC_044250.1:15198551-15198937 + STMP1 Specie-Specific non_coding - UCSC
SUGT1P1 NC_044258.1:2039252-2039471 + SUGT1 Orthologus non_coding - UCSC
TFCP2L1P1 NC_044246.1:75822949-75823163 + TFCP2L1 Orthologus non_coding - UCSC
THUMPD2P1 NC_044246.1:38713280-38713746 - THUMPD2 Specie-Specific coding not_under_selection UCSC
TJP1P1 NC_044245.1:78879832-78880819 + TJP1 Orthologus coding not_under_selection UCSC
UBE2D2P1 NC_044254.1:7083793-7084222 + UBE2D2 Orthologus coding not_under_selection UCSC
UBFD1P1 NC_044244.1:86434046-86434606 + UBFD1 Orthologus coding not_under_selection UCSC
XXYLT1P1 NC_044244.1:163178880-163179140 - XXYLT1 Orthologus non_coding - UCSC
YBX3P1 NC_044246.1:89034604-89034982 + YBX3 Specie-Specific coding not_under_selection UCSC
YWHAEP1 NC_044244.1:138668186-138668529 - YWHAE Specie-Specific non_coding - UCSC
YWHAEP2 NC_044246.1:68402225-68402490 - YWHAE Specie-Specific non_coding - UCSC
YWHAEP3 NC_044250.1:13528658-13528924 + YWHAE Specie-Specific non_coding - UCSC