Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Sci Name Caloenas_nicobarica Caloenas_nicobarica Caloenas_nicobarica Caloenas_nicobarica
Clade Birds
Lineage Birds
Assembly_ID GCF_036013445.1
# of retrocopies 110
# of Parental genes 74
Retroname Coord Strand Parental Conservation Has_ORF Selection
ACTA1P1 NC_088258.1:3812195-3814415 + ACTA1 Orthologus coding under_selection UCSC
ACTA1P2 NC_088262.1:1172247-1173776 - ACTA1 Orthologus coding under_selection UCSC
ACTBP1 NC_088247.1:77618441-77618771 + ACTB Orthologus coding under_selection UCSC
ACTBP2 NC_088249.1:31605061-31605385 - ACTB Orthologus coding under_selection UCSC
ACTBP3 NC_088254.1:3748477-3749574 - ACTB Orthologus coding not_under_selection UCSC
AGFG1P1 NC_088245.1:30819927-30820238 + AGFG1 Specie-Specific non_coding - UCSC
AIPP1 NC_088256.1:1669904-1670326 + AIP Orthologus non_coding - UCSC
ARF3P1 NC_088249.1:1558595-1558794 + ARF3 Orthologus non_coding - UCSC
ARPC1AP1 NC_088247.1:105752097-105752701 + ARPC1A Specie-Specific non_coding - UCSC
ARPC2P1 NC_088245.1:35302586-35302857 - ARPC2 Specie-Specific non_coding - UCSC
BOD1L1P1 NC_088246.1:158814131-158814645 + BOD1L1 Orthologus non_coding - UCSC
BTBD7P1 NC_088265.1:7466110-7466454 - BTBD7 Orthologus non_coding - UCSC
CICP1 NC_088279.1:1027-8307 + CIC Specie-Specific coding not_under_selection UCSC
CNTD1P1 NC_088246.1:164960884-164961404 - CNTD1 Specie-Specific non_coding - UCSC
CYTH2P1 NC_088245.1:171696257-171697311 + CYTH2 Specie-Specific coding under_selection UCSC
DDHD1P1 NC_088254.1:1200289-1200523 - DDHD1 Orthologus non_coding - UCSC
DNAJC15P1 NC_088254.1:22528981-22529416 - DNAJC15 Orthologus coding not_under_selection UCSC
EMCNP1 NC_088245.1:215210800-215211046 - EMCN Specie-Specific coding not_under_selection UCSC
EMCNP2 NC_088248.1:27352864-27353001 + EMCN Orthologus non_coding - UCSC
EMCNP3 NC_088265.1:7907449-7907690 - EMCN Specie-Specific non_coding - UCSC
EMCNP4 NC_088266.1:73513-73727 + EMCN Specie-Specific non_coding - UCSC
EMCNP5 NC_088268.1:29574-29825 + EMCN Orthologus coding not_under_selection UCSC
EPHB2P1 NC_088246.1:141769816-141770187 + EPHB2 Specie-Specific coding not_under_selection UCSC
ESCO2P1 NC_088245.1:45048996-45049131 - ESCO2 Specie-Specific non_coding - UCSC
FRS2P1 NC_088249.1:56016081-56016309 + FRS2 Specie-Specific non_coding - UCSC
FRS2P2 NC_088257.1:8651732-8651878 - FRS2 Specie-Specific non_coding - UCSC
FRS2P3 NC_088271.1:5664610-5665056 + FRS2 Orthologus non_coding - UCSC
FRS2P4 NC_088284.1:10807204-10807641 + FRS2 Orthologus coding not_under_selection UCSC
FRS2P5 NC_088284.1:53281862-53282305 + FRS2 Orthologus coding not_under_selection UCSC
FRS2P6 NC_088284.1:55137566-55137863 - FRS2 Orthologus coding not_under_selection UCSC
FTH1P1 NC_088249.1:10723788-10723974 - FTH1 Specie-Specific non_coding - UCSC
FTH1P2 NC_088249.1:3957108-3957549 - FTH1 Specie-Specific coding not_under_selection UCSC
GATAD1P1 NC_088246.1:89414444-89414645 + GATAD1 Specie-Specific non_coding - UCSC
GATAD2BP1 NC_088271.1:2444231-2444405 - GATAD2B Orthologus non_coding - UCSC
GLRX5P1 NC_088249.1:45752752-45754138 + GLRX5 Specie-Specific coding not_under_selection UCSC
HPCAL4P1 NC_088267.1:4696566-4696736 + HPCAL4 Orthologus non_coding - UCSC
HSPA8P1 NC_088249.1:7407982-7409130 + HSPA8 Orthologus coding not_under_selection UCSC
IDH3AP1 NC_088245.1:26196686-26197106 + IDH3A Specie-Specific non_coding - UCSC
KNSTRNP1 NC_088245.1:46036851-46037139 - KNSTRN Orthologus coding under_selection UCSC
LIN28AP1 NC_088245.1:129485821-129486047 + LIN28A Orthologus non_coding - UCSC
LIN28AP2 NC_088268.1:798950-799541 + LIN28A Specie-Specific coding under_selection UCSC
LOC135985479P1 NC_088245.1:31077642-31077816 - LOC135985479 Specie-Specific non_coding - UCSC
LOC135985479P2 NC_088245.1:47587314-47587784 - LOC135985479 Specie-Specific non_coding - UCSC
LOC135986262P1 NC_088245.1:2110791-2111696 + LOC135986262 Orthologus coding not_under_selection UCSC
LOC135986262P2 NC_088250.1:25233427-25234214 + LOC135986262 Orthologus coding not_under_selection UCSC
LOC135986326P1 NC_088245.1:17212810-17213046 - LOC135986326 Orthologus non_coding - UCSC
LOC135986326P2 NC_088245.1:43179795-43180038 + LOC135986326 Orthologus non_coding - UCSC
LOC135986326P3 NC_088283.1:301021-301259 - LOC135986326 Orthologus coding not_under_selection UCSC
LOC135987797P1 NC_088245.1:43181508-43181912 + LOC135987797 Orthologus coding under_selection UCSC
LOC135991138P1 NC_088245.1:184867768-184868044 + LOC135991138 Orthologus non_coding - UCSC
LOC135995141P1 NC_088256.1:13208564-13208961 + LOC135995141 Orthologus coding not_under_selection UCSC
LOC135995927P1 NC_088273.1:3235796-3235981 + LOC135995927 Orthologus non_coding - UCSC
LOC135995927P2 NC_088275.1:1201036-1201247 - LOC135995927 Orthologus non_coding - UCSC
LOC135996603P1 NC_088245.1:149367569-149367766 + LOC135996603 Orthologus non_coding - UCSC
LOC135996603P2 NC_088247.1:43257078-43257275 + LOC135996603 Orthologus non_coding - UCSC
LOC135996603P3 NC_088256.1:7459354-7459558 + LOC135996603 Orthologus non_coding - UCSC
LOC135996603P4 NC_088267.1:2742402-2742605 + LOC135996603 Orthologus non_coding - UCSC
LOC135996990P1 NC_088277.1:2603974-2604875 - LOC135996990 Orthologus coding not_under_selection UCSC
LOC135999707P1 NC_088250.1:797460-798096 - LOC135999707 Specie-Specific coding not_under_selection UCSC
LOC135999707P2 NC_088254.1:1057841-1057998 + LOC135999707 Specie-Specific non_coding - UCSC
LOC135999707P3 NC_088256.1:556464-557099 - LOC135999707 Specie-Specific coding not_under_selection UCSC
LOC135999707P4 NC_088259.1:1323911-1324504 - LOC135999707 Orthologus coding not_under_selection UCSC
LOC135999707P5 NC_088265.1:6665382-6665617 + LOC135999707 Specie-Specific non_coding - UCSC
LOC135999707P6 NC_088265.1:7232201-7232436 + LOC135999707 Specie-Specific non_coding - UCSC
LOC135999707P7 NC_088266.1:208721-209350 - LOC135999707 Orthologus coding not_under_selection UCSC
LOC135999707P8 NC_088273.1:1249015-1249653 + LOC135999707 Orthologus coding not_under_selection UCSC
LOC135999707P9 NC_088273.1:2771452-2772091 + LOC135999707 Specie-Specific coding not_under_selection UCSC
LPAR2P1 NC_088260.1:4672318-4673652 + LPAR2 Specie-Specific coding under_selection UCSC
MIX23P1 NC_088245.1:88183223-88183495 + MIX23 Specie-Specific non_coding - UCSC
MRPL47P1 NC_088248.1:53526945-53527885 - MRPL47 Specie-Specific coding not_under_selection UCSC
N6AMT1P1 NC_088254.1:1914686-1914929 - N6AMT1 Specie-Specific non_coding - UCSC
NR2F6P1 NC_088284.1:83037245-83037428 + NR2F6 Orthologus non_coding - UCSC
NUFIP2P1 NC_088246.1:3316144-3316949 + NUFIP2 Orthologus non_coding - UCSC
OCRLP1 NC_088247.1:26780994-26782753 - OCRL Orthologus coding under_selection UCSC
OGFRP1 NC_088247.1:6688617-6688845 + OGFR Specie-Specific coding not_under_selection UCSC
P4HA2P1 NC_088245.1:69032226-69032449 + P4HA2 Specie-Specific non_coding - UCSC
PPIEP1 NC_088269.1:1557555-1557711 - PPIE Orthologus non_coding - UCSC
PPP2CAP1 NC_088251.1:1846382-1847102 - PPP2CA Orthologus non_coding - UCSC
PPP2CBP1 NC_088245.1:3007465-3007870 + PPP2CB Specie-Specific coding not_under_selection UCSC
PPP2CBP2 NC_088284.1:2362983-2363437 + PPP2CB Specie-Specific non_coding - UCSC
PRPS1P1 NC_088245.1:143402254-143402570 + PRPS1 Specie-Specific coding under_selection UCSC
PSMA7P1 NC_088265.1:7335335-7336127 - PSMA7 Orthologus coding under_selection UCSC
PSMA7P2 NW_027017717.1:54456-55234 - PSMA7 Specie-Specific coding under_selection UCSC
PTP4A2P1 NC_088255.1:4231441-4233316 + PTP4A2 Specie-Specific coding under_selection UCSC
RAP2CP1 NC_088252.1:28900401-28900904 - RAP2C Orthologus coding not_under_selection UCSC
RBX1P1 NC_088245.1:208772885-208773045 - RBX1 Orthologus non_coding - UCSC
RHOCP1 NC_088247.1:10805034-10805412 - RHOC Orthologus coding not_under_selection UCSC
RNF128P1 NC_088246.1:158795389-158795645 + RNF128 Specie-Specific coding not_under_selection UCSC
RPL39P1 NC_088249.1:56256315-56256723 + RPL39 Specie-Specific non_coding - UCSC
RPS3AP1 NC_088245.1:89021266-89022017 + RPS3A Orthologus coding not_under_selection UCSC
SDC4P1 NC_088249.1:58032417-58032737 + SDC4 Specie-Specific coding not_under_selection UCSC
SLC18B1P1 NC_088248.1:33437184-33437876 + SLC18B1 Orthologus coding not_under_selection UCSC
SMSP1 NC_088246.1:80689149-80689576 - SMS Orthologus non_coding - UCSC
SP1P1 NC_088250.1:20863341-20863614 - SP1 Orthologus coding not_under_selection UCSC
SRD5A1P1 NC_088245.1:85373164-85373534 - SRD5A1 Orthologus non_coding - UCSC
SRD5A1P2 NC_088246.1:123452209-123452700 + SRD5A1 Orthologus coding not_under_selection UCSC
SRD5A1P3 NC_088284.1:37305230-37305719 + SRD5A1 Specie-Specific coding not_under_selection UCSC
STK38LP1 NC_088245.1:6157030-6157520 - STK38L Orthologus non_coding - UCSC
TATDN3P1 NC_088248.1:2526171-2526388 + TATDN3 Specie-Specific non_coding - UCSC
TATDN3P2 NC_088248.1:28519916-28520133 + TATDN3 Specie-Specific non_coding - UCSC
TATDN3P3 NC_088249.1:4619234-4619490 - TATDN3 Specie-Specific non_coding - UCSC
TBCAP1 NC_088284.1:86775965-86776225 - TBCA Specie-Specific non_coding - UCSC
TCP1P1 NC_088247.1:113650078-113650559 + TCP1 Orthologus non_coding - UCSC
THOC7P1 NC_088249.1:65481180-65481400 - THOC7 Orthologus non_coding - UCSC
TJP1P1 NC_088246.1:88944778-88945904 + TJP1 Orthologus coding under_selection UCSC
TXNDC5P1 NC_088246.1:8158694-8159341 - TXNDC5 Specie-Specific coding not_under_selection UCSC
UBE2D2P1 NC_088264.1:8333642-8334185 + UBE2D2 Orthologus non_coding - UCSC
VAMP3P1 NC_088284.1:50390237-50390410 + VAMP3 Specie-Specific non_coding - UCSC
YIPF1P1 NC_088246.1:160944394-160944533 - YIPF1 Specie-Specific non_coding - UCSC
ZWILCHP1 NC_088251.1:33048283-33049551 + ZWILCH Orthologus coding not_under_selection UCSC