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Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Sci Name Thunnus_thynnus Thunnus_thynnus Thunnus_thynnus Thunnus_thynnus
Clade Fishes
Lineage Ray-finned_fishes
Assembly_ID GCF_963924715.1
# of retrocopies 199
# of Parental genes 136
Retroname Coord Strand Parental Conservation Has_ORF Selection
actb1P1 NC_089533.1:21639267-21640939 + actb1 Orthologus coding under_selection UCSC
actb2P1 NC_089517.1:24192860-24194985 - actb2 Orthologus coding under_selection UCSC
actb2P2 NC_089519.1:34743630-34747257 - actb2 Orthologus coding under_selection UCSC
actb2P3 NC_089532.1:12756571-12759022 - actb2 Orthologus coding under_selection UCSC
actb2P4 NC_089534.1:23183301-23185451 - actb2 Orthologus coding not_under_selection UCSC
adam17aP1 NC_089534.1:5958382-5958551 - adam17a Orthologus non_coding - UCSC
adcy9P1 NC_089533.1:14634423-14634755 + adcy9 Orthologus coding under_selection UCSC
adora2abP1 NC_089518.1:10427922-10428181 + adora2ab Orthologus coding under_selection UCSC
ahsa1bP1 NC_089530.1:1613823-1614040 + ahsa1b Orthologus non_coding - UCSC
aldh18a1P1 NC_089530.1:8650853-8651086 - aldh18a1 Orthologus coding under_selection UCSC
bsk146P1 NC_089533.1:5037167-5040040 - bsk146 Orthologus non_coding - UCSC
capza1bP1 NC_089523.1:28206820-28207809 - capza1b Orthologus non_coding - UCSC
ccdc85aP1 NC_089532.1:26876980-26877175 + ccdc85a Orthologus non_coding - UCSC
ccdc85aP2 NC_089534.1:10228812-10229020 + ccdc85a Orthologus non_coding - UCSC
cd59aP1 NC_089540.1:20509633-20512348 + cd59a Orthologus coding not_under_selection UCSC
cfap77P1 NC_089533.1:28014608-28015369 - cfap77 Orthologus coding not_under_selection UCSC
chrm3bP1 NC_089530.1:19557172-19557484 - chrm3b Orthologus coding under_selection UCSC
cnga1bP1 NC_089519.1:21780155-21780590 - cnga1b Orthologus coding not_under_selection UCSC
cnga1bP2 NC_089524.1:28148710-28149093 - cnga1b Orthologus coding under_selection UCSC
cnga1bP3 NC_089529.1:10002306-10002601 - cnga1b Orthologus coding not_under_selection UCSC
cnga1bP4 NC_089540.1:1012972-1013200 - cnga1b Orthologus coding not_under_selection UCSC
crygn2P1 NC_089528.1:23134024-23134253 - crygn2 Orthologus coding under_selection UCSC
dap1bP1 NC_089538.1:23652613-23652797 - dap1b Specie-Specific non_coding - UCSC
ddx18P1 NC_089538.1:26281052-26281313 + ddx18 Orthologus coding not_under_selection UCSC
diras1aP1 NC_089532.1:11208188-11210094 + diras1a Orthologus coding under_selection UCSC
dtx1P1 NC_089538.1:12745344-12745538 + dtx1 Orthologus non_coding - UCSC
eef1b2P1 NC_089528.1:20327664-20327862 - eef1b2 Orthologus non_coding - UCSC
eef1daP1 NC_089523.1:6532544-6532812 + eef1da Orthologus coding under_selection UCSC
eif4g2bP1 NC_089525.1:33401973-33402431 - eif4g2b Specie-Specific non_coding - UCSC
enc2P1 NC_089524.1:18744397-18744589 + enc2 Orthologus non_coding - UCSC
enc3P1 NC_089518.1:5054609-5054788 + enc3 Orthologus non_coding - UCSC
enc3P2 NC_089535.1:8356540-8356788 - enc3 Orthologus coding under_selection UCSC
esrrgaP1 NC_089534.1:14207554-14207736 - esrrga Orthologus non_coding - UCSC
fabp4bP1 NC_089521.1:2562762-2562907 + fabp4b Orthologus non_coding - UCSC
fabp4bP2 NC_089523.1:31249395-31249534 + fabp4b Orthologus non_coding - UCSC
fabp4bP3 NC_089531.1:1002109-1002281 - fabp4b Orthologus non_coding - UCSC
fabp4bP4 NC_089535.1:8407373-8407514 + fabp4b Orthologus non_coding - UCSC
fgfrl1aP1 NC_089532.1:17013784-17013981 - fgfrl1a Orthologus non_coding - UCSC
fshrP1 NC_089530.1:11220267-11220493 + fshr Specie-Specific coding under_selection UCSC
gnai3P1 NC_089538.1:9977152-9978042 - gnai3 Specie-Specific coding under_selection UCSC
grin2aaP1 NC_089519.1:28434578-28435827 - grin2aa Orthologus coding under_selection UCSC
grin2daP1 NC_089526.1:14686534-14686692 - grin2da Orthologus non_coding - UCSC
grin2daP2 NC_089536.1:8776326-8778566 - grin2da Orthologus coding not_under_selection UCSC
grm3P1 NC_089520.1:18126275-18126423 + grm3 Orthologus non_coding - UCSC
grm5aP1 NC_089534.1:17980565-17980751 - grm5a Orthologus non_coding - UCSC
grm8aP1 NC_089520.1:11276077-11276245 + grm8a Orthologus non_coding - UCSC
grm8aP2 NC_089520.1:973088-973504 - grm8a Orthologus coding not_under_selection UCSC
grm8aP3 NC_089521.1:33309024-33309857 + grm8a Orthologus coding not_under_selection UCSC
h3f3cP1 NC_089519.1:34688065-34688471 - h3f3c Orthologus coding under_selection UCSC
h3f3cP2 NC_089528.1:28759821-28760227 - h3f3c Orthologus coding under_selection UCSC
h3f3cP3 NC_089529.1:29478341-29478747 + h3f3c Orthologus coding under_selection UCSC
hsc70P1 NC_089522.1:15541394-15542377 + hsc70 Orthologus coding under_selection UCSC
hsc70P2 NC_089533.1:2207092-2208633 - hsc70 Specie-Specific coding not_under_selection UCSC
irx1bP1 NC_089517.1:29107333-29107501 - irx1b Orthologus non_coding - UCSC
irx1bP2 NC_089521.1:35674059-35674215 + irx1b Orthologus non_coding - UCSC
irx1bP3 NC_089526.1:22229569-22229722 - irx1b Orthologus non_coding - UCSC
irx4bP1 NC_089517.1:29256253-29256438 - irx4b Orthologus non_coding - UCSC
kcnh5bP1 NC_089519.1:37895605-37897268 - kcnh5b Orthologus coding not_under_selection UCSC
kcnh5bP2 NC_089534.1:16292208-16294482 + kcnh5b Orthologus coding not_under_selection UCSC
kcnv2aP1 NC_089518.1:12778148-12778318 - kcnv2a Orthologus non_coding - UCSC
lgi1bP1 NC_089530.1:15809118-15809914 - lgi1b Orthologus coding not_under_selection UCSC
LOC137167931P1 NC_089536.1:16131220-16131390 + LOC137167931 Orthologus non_coding - UCSC
LOC137168159P1 NC_089521.1:25647490-25647913 - LOC137168159 Specie-Specific non_coding - UCSC
LOC137168285P1 NC_089531.1:9605255-9605623 - LOC137168285 Orthologus coding not_under_selection UCSC
LOC137168368P1 NC_089521.1:29084438-29085592 - LOC137168368 Specie-Specific non_coding - UCSC
LOC137168368P2 NC_089532.1:14810807-14811478 - LOC137168368 Specie-Specific coding not_under_selection UCSC
LOC137168368P3 NC_089539.1:25982952-25983682 + LOC137168368 Specie-Specific non_coding - UCSC
LOC137170351P1 NC_089518.1:28904567-28905232 + LOC137170351 Orthologus coding not_under_selection UCSC
LOC137170520P1 NC_089518.1:1712760-1713092 + LOC137170520 Orthologus coding under_selection UCSC
LOC137170734P1 NC_089535.1:12826012-12826177 - LOC137170734 Orthologus non_coding - UCSC
LOC137171212P1 NC_089535.1:14171612-14171828 - LOC137171212 Orthologus non_coding - UCSC
LOC137171999P1 NC_089533.1:14047124-14047513 + LOC137171999 Orthologus coding under_selection UCSC
LOC137172715P1 NC_089530.1:30747889-30748056 - LOC137172715 Orthologus non_coding - UCSC
LOC137173463P1 NC_089529.1:12515665-12516198 + LOC137173463 Orthologus non_coding - UCSC
LOC137173463P2 NC_089532.1:28845425-28845572 - LOC137173463 Specie-Specific non_coding - UCSC
LOC137174064P1 NC_089524.1:34502695-34503062 - LOC137174064 Orthologus non_coding - UCSC
LOC137175895P1 NC_089521.1:22460348-22460733 - LOC137175895 Orthologus coding not_under_selection UCSC
LOC137176373P1 NC_089533.1:14598586-14599348 + LOC137176373 Orthologus coding not_under_selection UCSC
LOC137176855P1 NC_089540.1:20779744-20780707 - LOC137176855 Orthologus non_coding - UCSC
LOC137177192P1 NC_089527.1:20945620-20945891 - LOC137177192 Orthologus coding not_under_selection UCSC
LOC137177225P1 NC_089533.1:29294915-29295321 - LOC137177225 Orthologus non_coding - UCSC
LOC137179444P1 NC_089524.1:7435862-7437522 + LOC137179444 Specie-Specific coding not_under_selection UCSC
LOC137179669P1 NC_089525.1:26742580-26742732 + LOC137179669 Orthologus non_coding - UCSC
LOC137180043P1 NC_089533.1:11123462-11124040 - LOC137180043 Orthologus coding under_selection UCSC
LOC137181446P1 NC_089522.1:21615270-21615431 - LOC137181446 Orthologus non_coding - UCSC
LOC137182159P1 NC_089531.1:8042454-8042630 - LOC137182159 Orthologus non_coding - UCSC
LOC137182664P1 NC_089529.1:24653699-24653848 + LOC137182664 Orthologus non_coding - UCSC
LOC137182881P1 NC_089539.1:18718574-18719094 + LOC137182881 Orthologus coding not_under_selection UCSC
LOC137184214P1 NC_089519.1:34078222-34079569 - LOC137184214 Orthologus coding not_under_selection UCSC
LOC137184814P1 NC_089525.1:26863567-26865060 + LOC137184814 Orthologus coding not_under_selection UCSC
LOC137185738P1 NC_089529.1:22722132-22722549 - LOC137185738 Orthologus coding under_selection UCSC
LOC137185738P2 NC_089539.1:24031697-24032110 + LOC137185738 Orthologus coding under_selection UCSC
LOC137185975P1 NC_089532.1:8777662-8777943 - LOC137185975 Orthologus coding under_selection UCSC
LOC137192142P1 NC_089519.1:5232862-5233011 + LOC137192142 Orthologus non_coding - UCSC
LOC137192301P1 NC_089527.1:6541079-6541468 + LOC137192301 Specie-Specific non_coding - UCSC
LOC137192556P1 NC_089528.1:2048330-2048506 - LOC137192556 Orthologus non_coding - UCSC
LOC137192556P2 NC_089537.1:10925788-10926033 + LOC137192556 Orthologus coding not_under_selection UCSC
LOC137192556P3 NC_089540.1:18417307-18423013 - LOC137192556 Orthologus coding not_under_selection UCSC
LOC137192731P1 NC_089523.1:21656910-21657371 + LOC137192731 Orthologus coding not_under_selection UCSC
LOC137192731P2 NC_089528.1:14382099-14382449 - LOC137192731 Orthologus coding not_under_selection UCSC
LOC137192785P1 NC_089525.1:2602957-2603438 - LOC137192785 Orthologus coding not_under_selection UCSC
LOC137192785P2 NC_089530.1:2593721-2593890 + LOC137192785 Orthologus non_coding - UCSC
LOC137192983P1 NC_089535.1:17113780-17114006 + LOC137192983 Orthologus non_coding - UCSC
LOC137193025P1 NC_089534.1:26960604-26961066 + LOC137193025 Orthologus non_coding - UCSC
LOC137193068P1 NC_089529.1:3201067-3204434 + LOC137193068 Orthologus coding not_under_selection UCSC
LOC137193242P1 NC_089540.1:8918703-8919226 - LOC137193242 Orthologus coding not_under_selection UCSC
LOC137194062P1 NC_089517.1:38495866-38496064 + LOC137194062 Orthologus non_coding - UCSC
LOC137194074P1 NC_089528.1:9628942-9629190 - LOC137194074 Orthologus non_coding - UCSC
LOC137194361P1 NC_089537.1:20358813-20359033 - LOC137194361 Orthologus non_coding - UCSC
LOC137195148P1 NC_089519.1:5051071-5051229 + LOC137195148 Orthologus non_coding - UCSC
LOC137195148P2 NC_089525.1:15054609-15054859 + LOC137195148 Orthologus coding not_under_selection UCSC
LOC137195439P1 NC_089523.1:20236171-20238671 + LOC137195439 Orthologus coding under_selection UCSC
LOC137195810P1 NC_089538.1:18894354-18896413 - LOC137195810 Orthologus non_coding - UCSC
LOC137196141P1 NC_089538.1:816625-816834 + LOC137196141 Orthologus non_coding - UCSC
LOC137196196P1 NC_089525.1:14242922-14243479 - LOC137196196 Orthologus coding under_selection UCSC
LOC137197886P1 NC_089536.1:11110992-11111761 - LOC137197886 Orthologus coding not_under_selection UCSC
LOC137197914P1 NC_089530.1:13464735-13465793 + LOC137197914 Orthologus coding not_under_selection UCSC
LOC137197956P1 NC_089534.1:20017697-20018069 - LOC137197956 Orthologus coding not_under_selection UCSC
LOC137198823P1 NC_089523.1:24335315-24335523 + LOC137198823 Orthologus non_coding - UCSC
LOC137198998P1 NC_089540.1:2415228-2415413 + LOC137198998 Orthologus non_coding - UCSC
LOC137199637P1 NC_089519.1:7134229-7135335 - LOC137199637 Orthologus coding under_selection UCSC
LOC137199637P2 NC_089526.1:13587245-13588370 - LOC137199637 Orthologus coding under_selection UCSC
LOC137199637P3 NC_089531.1:7076628-7078400 + LOC137199637 Orthologus coding under_selection UCSC
LOC137199637P4 NC_089537.1:2342652-2343418 - LOC137199637 Orthologus coding under_selection UCSC
LOC137200926P1 NC_089525.1:30050425-30050628 - LOC137200926 Orthologus non_coding - UCSC
LOC137200926P2 NC_089536.1:7628778-7628928 + LOC137200926 Orthologus non_coding - UCSC
LOC137200966P1 NC_089519.1:856433-856672 - LOC137200966 Specie-Specific coding under_selection UCSC
LOC137201187P1 NC_089536.1:15686085-15687473 - LOC137201187 Orthologus coding not_under_selection UCSC
mibp2P1 NC_089534.1:22906350-22906490 - mibp2 Orthologus non_coding - UCSC
ndufs8aP1 NC_089525.1:17921637-17921792 + ndufs8a Orthologus non_coding - UCSC
nficP1 NC_089519.1:1513304-1513478 - nfic Orthologus non_coding - UCSC
nficP2 NC_089533.1:24371666-24371856 + nfic Orthologus non_coding - UCSC
nlgn2aP1 NC_089524.1:31483008-31483160 - nlgn2a Orthologus non_coding - UCSC
nlgn2aP2 NC_089540.1:1697017-1697180 + nlgn2a Orthologus non_coding - UCSC
nr2f5P1 NC_089517.1:32633775-32634076 + nr2f5 Orthologus coding not_under_selection UCSC
nr2f5P2 NC_089518.1:18242047-18246558 - nr2f5 Orthologus coding not_under_selection UCSC
nr2f5P3 NC_089521.1:17711247-17711603 - nr2f5 Orthologus coding not_under_selection UCSC
ntrk2aP1 NC_089517.1:32062980-32064968 - ntrk2a Orthologus coding under_selection UCSC
oprm1P1 NC_089526.1:20291982-20292825 - oprm1 Orthologus coding not_under_selection UCSC
oprm1P2 NC_089528.1:20727415-20727633 + oprm1 Orthologus non_coding - UCSC
oprm1P3 NC_089531.1:26334592-26334749 + oprm1 Orthologus non_coding - UCSC
oprm1P4 NC_089537.1:9808025-9808243 + oprm1 Orthologus non_coding - UCSC
pacrgP1 NC_089526.1:27651925-27652503 - pacrg Orthologus coding under_selection UCSC
pacrgP2 NC_089530.1:3695088-3695797 + pacrg Orthologus coding under_selection UCSC
pacrgP3 NC_089531.1:29261179-29261547 + pacrg Orthologus coding under_selection UCSC
pacrgP4 NC_089533.1:17614066-17614406 + pacrg Specie-Specific coding not_under_selection UCSC
pacrgP5 NC_089533.1:21054332-21054895 + pacrg Orthologus coding not_under_selection UCSC
pacrgP6 NC_089533.1:22497769-22498380 + pacrg Orthologus coding not_under_selection UCSC
pacrgP7 NC_089537.1:9778193-9778796 - pacrg Orthologus coding under_selection UCSC
piezo1P1 NC_089528.1:23729572-23729813 - piezo1 Orthologus coding under_selection UCSC
pik3caP1 NC_089528.1:10559369-10559621 - pik3ca Orthologus coding under_selection UCSC
prkacabP1 NC_089524.1:17799686-17799847 + prkacab Orthologus non_coding - UCSC
prkacabP2 NC_089528.1:17985045-17985205 - prkacab Orthologus non_coding - UCSC
prkd1P1 NC_089523.1:19461398-19461640 - prkd1 Orthologus coding under_selection UCSC
prkd1P2 NC_089532.1:20908266-20908490 + prkd1 Orthologus coding under_selection UCSC
prkd1P3 NC_089534.1:4778205-4778459 + prkd1 Orthologus coding not_under_selection UCSC
prkd1P4 NC_089538.1:16905345-16905585 - prkd1 Orthologus coding not_under_selection UCSC
rab39bbP1 NC_089529.1:17665176-17665789 + rab39bb Orthologus non_coding - UCSC
rhoabP1 NC_089534.1:20102315-20102690 - rhoab Orthologus coding not_under_selection UCSC
rhogbP1 NC_089525.1:13264630-13264986 + rhogb Orthologus coding not_under_selection UCSC
rom1bP1 NC_089529.1:7621937-7622108 + rom1b Orthologus non_coding - UCSC
rpl23aP1 NC_089526.1:22041815-22041946 - rpl23a Orthologus non_coding - UCSC
rpl38P1 NC_089527.1:15022298-15022503 - rpl38 Orthologus non_coding - UCSC
sec23aP1 NC_089519.1:8982638-8982855 + sec23a Orthologus non_coding - UCSC
selenbp1P1 NC_089526.1:33477181-33477501 - selenbp1 Orthologus coding not_under_selection UCSC
si:ch211-154o6.3P1 NC_089518.1:30542277-30542511 - si:ch211-154o6.3 Specie-Specific non_coding - UCSC
si:ch211-284e13.5P1 NC_089518.1:25563512-25563764 + si:ch211-284e13.5 Specie-Specific non_coding - UCSC
si:ch73-335l21.1P1 NC_089529.1:10967379-10967701 + si:ch73-335l21.1 Orthologus coding under_selection UCSC
si:dkey-119f1.1P1 NC_089517.1:14764350-14764616 + si:dkey-119f1.1 Specie-Specific non_coding - UCSC
si:dkey-222f2.1P1 NC_089520.1:24828231-24828425 + si:dkey-222f2.1 Orthologus non_coding - UCSC
si:dkey-222f2.1P2 NC_089522.1:7329566-7329757 - si:dkey-222f2.1 Orthologus non_coding - UCSC
slc8a1bP1 NC_089519.1:38317829-38318097 + slc8a1b Orthologus coding under_selection UCSC
slc8a1bP2 NC_089532.1:7674322-7674499 - slc8a1b Orthologus non_coding - UCSC
smad1P1 NC_089521.1:20027051-20027195 + smad1 Orthologus non_coding - UCSC
smad5P1 NC_089517.1:11518844-11518988 - smad5 Orthologus non_coding - UCSC
srp68P1 NC_089522.1:1384112-1384397 - srp68 Orthologus coding under_selection UCSC
tmcc1aP1 NC_089520.1:19668390-19668725 - tmcc1a Orthologus non_coding - UCSC
tmcc3P1 NC_089521.1:22686994-22687155 - tmcc3 Orthologus non_coding - UCSC
tpi1bP1 NC_089520.1:8313431-8313904 - tpi1b Orthologus non_coding - UCSC
tpi1bP2 NC_089524.1:33619736-33619883 - tpi1b Orthologus non_coding - UCSC
trmt2aP1 NC_089539.1:22044426-22044613 - trmt2a Orthologus non_coding - UCSC
trpm7P1 NC_089535.1:5359270-5359587 - trpm7 Orthologus coding under_selection UCSC
tuba5P1 NC_089522.1:27442274-27443173 + tuba5 Orthologus coding under_selection UCSC
tuba5P2 NC_089522.1:28983982-28984881 - tuba5 Orthologus coding under_selection UCSC
tuba5P3 NC_089523.1:28981670-28982569 + tuba5 Orthologus coding under_selection UCSC
tuba5P4 NC_089527.1:15832041-15832913 - tuba5 Orthologus coding not_under_selection UCSC
tuba5P5 NC_089530.1:18966367-18967266 - tuba5 Orthologus coding under_selection UCSC
tuba5P6 NC_089534.1:16361025-16361924 - tuba5 Orthologus coding under_selection UCSC
tuba5P7 NC_089540.1:14604647-14605522 + tuba5 Orthologus coding under_selection UCSC
tuba5P8 NC_089540.1:18367066-18367965 - tuba5 Orthologus coding under_selection UCSC
tuba5P9 NC_089540.1:8391150-8392049 + tuba5 Orthologus coding under_selection UCSC
tubb5P1 NC_089520.1:14272412-14273165 + tubb5 Orthologus coding not_under_selection UCSC
tubb5P2 NC_089528.1:17370494-17371510 - tubb5 Orthologus coding under_selection UCSC
tubb6P1 NC_089532.1:23898902-23900002 + tubb6 Orthologus coding not_under_selection UCSC
xkr7bP1 NC_089528.1:836808-836990 + xkr7b Orthologus non_coding - UCSC
ywhabaP1 NC_089529.1:6505268-6505492 - ywhaba Orthologus coding not_under_selection UCSC
ywhag1P1 NC_089522.1:21329289-21329480 + ywhag1 Orthologus non_coding - UCSC
zgc:65894P1 NC_089518.1:6184926-6185988 - zgc:65894 Orthologus coding under_selection UCSC
zgc:65894P2 NC_089533.1:12458241-12459300 - zgc:65894 Orthologus coding under_selection UCSC