Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Sci Name Apteryx_mantelli Apteryx_mantelli Apteryx_mantelli Apteryx_mantelli
Clade Birds
Lineage Birds
Assembly_ID GCF_036417845.1
# of retrocopies 79
# of Parental genes 59
Retroname Coord Strand Parental Conservation Has_ORF Selection
ACTA1P1 NC_089993.1:17638776-17640989 - ACTA1 Orthologus coding under_selection UCSC
ACTA1P2 NC_089996.1:16427154-16428700 + ACTA1 Orthologus coding under_selection UCSC
ACTBP1 NC_089980.1:56548201-56549835 + ACTB Orthologus coding under_selection UCSC
ACTBP2 NC_089981.1:56741349-56741671 + ACTB Orthologus non_coding - UCSC
ACTBP3 NC_089992.1:23724573-23725700 + ACTB Orthologus coding under_selection UCSC
ADSLP1 NC_089980.1:42686186-42686442 - ADSL Orthologus coding not_under_selection UCSC
ARF3P1 NC_089981.1:87579048-87579247 - ARF3 Orthologus non_coding - UCSC
ARXP1 NC_089978.1:2115877-2116022 - ARX Orthologus non_coding - UCSC
BTF3L4P1 NC_089980.1:22276126-22276396 - BTF3L4 Orthologus non_coding - UCSC
CBX3P1 NC_089982.1:2311950-2312556 + CBX3 Orthologus non_coding - UCSC
COPS7AP1 NC_089980.1:61877777-61878424 - COPS7A Specie-Specific non_coding - UCSC
CRLS1P1 NC_089981.1:17995741-17996135 - CRLS1 Orthologus coding under_selection UCSC
CRLS1P2 NC_089990.1:25183187-25183414 + CRLS1 Specie-Specific non_coding - UCSC
EHD3P1 NC_089990.1:13878277-13879523 + EHD3 Specie-Specific coding under_selection UCSC
FOXI2P1 NC_089995.1:18825225-18825471 - FOXI2 Specie-Specific coding not_under_selection UCSC
H2BK1P1 NC_089978.1:168240946-168241188 - H2BK1 Orthologus non_coding - UCSC
H2BK1P2 NC_089978.1:205246650-205246896 + H2BK1 Orthologus coding not_under_selection UCSC
H2BK1P3 NC_090011.1:1882677-1882932 + H2BK1 Specie-Specific coding under_selection UCSC
HCN1P1 NC_089992.1:24500345-24502743 + HCN1 Orthologus coding not_under_selection UCSC
HINT1P1 NC_089978.1:205694879-205695026 - HINT1 Orthologus non_coding - UCSC
HPCAL4P1 NC_090004.1:6002823-6003003 - HPCAL4 Orthologus non_coding - UCSC
HSPA8P1 NC_089981.1:81797440-81798171 - HSPA8 Orthologus coding not_under_selection UCSC
LOC106484196P1 NC_089978.1:220793217-220793501 - LOC106484196 Orthologus coding not_under_selection UCSC
LOC106488573P1 NC_089978.1:220787874-220788155 + LOC106488573 Orthologus coding not_under_selection UCSC
LOC106491476P1 NC_090011.1:1819190-1819583 + LOC106491476 Specie-Specific coding not_under_selection UCSC
LOC106493522P1 NC_089998.1:3618537-3618724 - LOC106493522 Orthologus non_coding - UCSC
LOC106493904P1 NC_089978.1:168226679-168227078 + LOC106493904 Orthologus coding not_under_selection UCSC
LOC106494230P1 NC_089990.1:3201948-3202152 + LOC106494230 Orthologus non_coding - UCSC
LOC106494230P2 NC_090004.1:8799586-8799790 - LOC106494230 Orthologus non_coding - UCSC
LOC106496871P1 NC_090016.1:259372-259557 + LOC106496871 Orthologus non_coding - UCSC
LOC106496872P1 NC_089995.1:4716058-4716264 - LOC106496872 Orthologus non_coding - UCSC
LOC106498024P1 NC_089980.1:34193937-34194922 - LOC106498024 Orthologus coding not_under_selection UCSC
LOC106499876P1 NC_089978.1:33311782-33312125 - LOC106499876 Specie-Specific non_coding - UCSC
LOC106500247P1 NC_089983.1:32585159-32586077 - LOC106500247 Orthologus coding not_under_selection UCSC
LOC106500247P2 NC_090010.1:3517802-3518725 - LOC106500247 Orthologus coding not_under_selection UCSC
LOC136991347P1 NC_089979.1:167284488-167285096 - LOC136991347 Specie-Specific non_coding - UCSC
LOC136991347P2 NC_089979.1:168742119-168743012 - LOC136991347 Specie-Specific coding not_under_selection UCSC
LOC136991640P1 NC_089980.1:134105738-134106304 - LOC136991640 Specie-Specific coding not_under_selection UCSC
LOC136991641P1 NC_089980.1:50520802-50520970 - LOC136991641 Specie-Specific non_coding - UCSC
LOC136991643P1 NC_089980.1:137454324-137454662 + LOC136991643 Specie-Specific non_coding - UCSC
LOC136993213P1 NC_090020.1:78794253-78794627 - LOC136993213 Orthologus coding not_under_selection UCSC
LOC136993213P2 NC_090020.1:79663510-79663884 - LOC136993213 Specie-Specific coding not_under_selection UCSC
LOC136995607P1 NC_090020.1:78795127-78795893 - LOC136995607 Orthologus coding not_under_selection UCSC
LOC136995607P2 NC_090020.1:79664462-79665228 - LOC136995607 Specie-Specific coding under_selection UCSC
LOC136995874P1 NW_027118683.1:34773-36217 + LOC136995874 Specie-Specific coding not_under_selection UCSC
LOC136996439P1 NW_027118755.1:1721487-1727526 + LOC136996439 Specie-Specific coding not_under_selection UCSC
LOC136996439P2 NW_027118755.1:75025-81762 + LOC136996439 Specie-Specific coding not_under_selection UCSC
LOC136996439P3 NW_027118792.1:403300-409336 - LOC136996439 Specie-Specific coding not_under_selection UCSC
LRR1P1 NC_089978.1:180078528-180079072 - LRR1 Orthologus non_coding - UCSC
MFSD8P1 NC_089978.1:90902558-90902809 + MFSD8 Orthologus non_coding - UCSC
MICOS10P1 NC_089979.1:39180050-39180251 - MICOS10 Orthologus non_coding - UCSC
MICOS10P2 NC_089982.1:35835592-35835797 - MICOS10 Orthologus non_coding - UCSC
MRPL18P1 NC_089978.1:121172668-121173056 + MRPL18 Orthologus coding not_under_selection UCSC
MYBPC2P1 NW_027118767.1:17786-22244 + MYBPC2 Specie-Specific coding not_under_selection UCSC
NR2F6P1 NC_089992.1:6175554-6175727 - NR2F6 Orthologus non_coding - UCSC
NR2F6P2 NC_090020.1:52346222-52346423 - NR2F6 Orthologus non_coding - UCSC
PAIP2BP1 NC_089980.1:42711668-42711915 + PAIP2B Specie-Specific non_coding - UCSC
PANK3P1 NC_089979.1:74547178-74547320 - PANK3 Specie-Specific non_coding - UCSC
RAP2AP1 NC_089986.1:1196349-1196711 + RAP2A Orthologus coding not_under_selection UCSC
RBM47P1 NC_089981.1:76723705-76723859 - RBM47 Specie-Specific non_coding - UCSC
RHOCP1 NC_089980.1:128923936-128924317 + RHOC Orthologus coding not_under_selection UCSC
RPL15P1 NC_089981.1:52241244-52241560 - RPL15 Orthologus coding not_under_selection UCSC
RPL15P2 NC_089990.1:21588796-21588958 - RPL15 Orthologus non_coding - UCSC
RPL22P1 NC_089981.1:22950169-22950389 + RPL22 Specie-Specific non_coding - UCSC
RPL26L1P1 NC_089979.1:134342461-134342637 + RPL26L1 Specie-Specific non_coding - UCSC
RPL30P1 NC_089978.1:36254647-36254794 - RPL30 Specie-Specific non_coding - UCSC
RPL35AP1 NC_089978.1:135132778-135132945 - RPL35A Specie-Specific non_coding - UCSC
RPL36AP1 NC_089978.1:69019225-69019423 + RPL36A Orthologus non_coding - UCSC
RPL7L1P1 NC_089982.1:65258797-65259006 - RPL7L1 Orthologus non_coding - UCSC
SLC25A15P1 NC_089980.1:78984274-78984695 + SLC25A15 Specie-Specific coding not_under_selection UCSC
SNAI3P1 NC_089979.1:1054148-1054290 - SNAI3 Orthologus non_coding - UCSC
SNAI3P2 NC_089995.1:18626897-18627039 + SNAI3 Orthologus non_coding - UCSC
SP1P1 NC_089979.1:134747093-134747342 + SP1 Orthologus coding not_under_selection UCSC
SP1P2 NC_089983.1:26188745-26188972 - SP1 Orthologus non_coding - UCSC
SP1P3 NC_089983.1:27770407-27770674 - SP1 Orthologus coding not_under_selection UCSC
TUFMP1 NC_089979.1:32547976-32549522 + TUFM Specie-Specific coding under_selection UCSC
VAPAP1 NC_089979.1:155038365-155038638 - VAPA Orthologus non_coding - UCSC
VAPAP2 NC_090020.1:18530233-18530506 - VAPA Specie-Specific coding not_under_selection UCSC
ZIC5P1 NC_089990.1:6937981-6939006 + ZIC5 Orthologus coding under_selection UCSC